Manuscript: A quantitative comparison of Calvin-Benson cycle models.

A quantitative comparison of Calvin-Benson cycle models.

  • Anne Arnold
  • Zoran Nikoloski
Trends Plant Sci. 2011; 16 (12): 676-683
Abstract
The Calvin-Benson cycle (CBC) provides the precursors for biomass synthesis necessary for plant growth. The dynamic behavior and yield of the CBC depend on the environmental conditions and regulation of the cellular state. Accurate quantitative models hold the promise of identifying the key determinants of the tightly regulated CBC function and their effects on the responses in future climates. We provide an integrative analysis of the largest compendium of existing models for photosynthetic processes. Based on the proposed ranking, our framework facilitates the discovery of best-performing models with regard to metabolomics data and of candidates for metabolic engineering.
Model Organism Tissue Process type
arnold1 Arabidopsis thaliana growth
arnold10 Arabidopsis thaliana growth
arnold10 Arabidopsis thaliana growth
arnold11 Arabidopsis thaliana growth
arnold2 Arabidopsis thaliana growth
arnold3 Arabidopsis thaliana growth
arnold4 Arabidopsis thaliana growth
arnold5 Arabidopsis thaliana growth
arnold6 Arabidopsis thaliana growth
arnold7 Arabidopsis thaliana growth
arnold8 Arabidopsis thaliana growth
arnold9 Arabidopsis thaliana growth