#yang #reactions R1: $pool = {1.0}x1 cell * K15 * x15 * lin * (1 + x4 / KI19 + x2 / KI20 + x13 / KI21 + x11 / KI22) / (lin + k15 * (1 + x1 / ks)) R10: {1.0}x1 = {1.0}x10 cell * K21 * x21 * x1 / (x1 + k21 * (1 + x5 / ki7 + x3 / ki8 + x7 / ki11 + x11 / ki12 + x10 / ks)) R11: {1.0}x10 = {1.0}x11 cell * K24 * x24 * x10 / (x10 + k24 * (1 + x11 / ks)) R12: {1.0}x10 = {1.0}x12 cell * K21 * x21 * x10 / (x10 + k21 * (1 + x5 / ki7 + x3 / ki8 + x7 / ki11 + x11 / ki12 + x12 / ks)) R13: {1.0}x12 = {1.0}x13 cell * K22 * x22 * x12 / (x12 + k22 * (1 + x13 / ks)) R14: {1.0}x13 = {1.0}x14 cell * K23 * x23 * x13 / (x13 + k23 * (1 + x5 / ki14 + x11 / ki15 + x14 / ks)) R16: $pool = {1.0}x16 cell * a24 * x7 * x7 / (x7 * x7 + KI24 * KI24) R17: {1.0}x17 = $pool cell * ki17 * x2 * x17 R18: {1.0}x9 = $pool kd9 * x9 * cell R19: {1.0}x20 = $pool cell * ki5 * x6 * x20 R2: {1.0}x1 = {1.0}x2 cell * K16 * x16 * x1 / (x1 + k16 * (1 + x2 / ks)) R20: {1.0}x20 = $pool ki4 * x2 * x20 * cell R21: $pool = {1.0}x21 cell * KI23 * x13 * x21 R22: {1.0}x22 = $pool cell * K22 * x22 * x12 / ((x12 + k22) * 129) R23: {1.0}x12 = $pool cell * x12 * kd12 R24: {1.0}x13 = $pool cell * kd13 * x13 R25: {1.0}x8 = $pool cell * kd8 * x8 R26: {1.0}x3 = $pool kd3 * x3 * cell R27: {1.0}x2 = $pool kd2 * cell * x2 R28: {1.0}x16 = $pool cell * kd16 * x16 R29: {1.0}x11 = $pool kd11 * x11 * cell R3: {1.0}x2 = {1.0}x3 cell * K24 * x24 * x2 / (x2 + k24 * (1 + x3 / ks)) R30: {1.0}x21 = $pool cell * ki9 * x12 * x21 R31: {1.0}x21 = $pool cell * ki10 * x10 * x21 R32: {1.0}x21 = $pool cell * ki6 * x21 * x2 R34: {1.0}x1 = $pool 0.1 * x1 * cell R4: {1.0}x1 = {1.0}x4 cell * K17 * x17 * x1 / (x1 + k17 * (1 + x4 / ki18 + x3 / ki16 + x4 / ks)) R5: {1.0}x4 = {1.0}x5 cell * K24 * x24 * x4 / (x4 + k24 * (1 + x5 / ks)) R6: {1.0}x1 = {1.0}x6 cell * K18 * x18 * x1 / (x1 + k18 * (1 + x7 / ki3 + x6 / ks)) R7: {1.0}x6 = {1.0}x7 cell * K19 * x19 * x6 / (x6 + k19 * (1 + x1 / ki1 + x3 / ki2 + x7 / ks)) R8: {1.0}x6 = {1.0}x8 cell * K20 * x20 * x6 / (x6 + k20 * (1 + x8 / ks)) R9: $pool = {1.0}x9 kd8 * x8 * cell #parameters K15 = 3600.0 K16 = 1000.0 K17 = 1000.0 K18 = 1000.0 K19 = 3000.0 K20 = 1599.0 K21 = 5000.0 K22 = 125.0 K23 = 150.0 K24 = 500.0 KI19 = 500.0 KI20 = 200.0 KI21 = 500.0 KI22 = 500.0 KI23 = 0.053 KI24 = 2.3e-05 a24 = 0.15 k15 = 2600.0 k16 = 70.0 k17 = 50.0 k18 = 50.0 k19 = 160.0 k20 = 4.0 k21 = 5.0 k22 = 20.0 k23 = 3.9 k24 = 70.0 kd11 = 0.001 kd12 = 0.07 kd13 = 0.01 kd16 = 0.01 kd2 = 0.05 kd3 = 0.01 kd8 = 0.1 kd9 = 0.001 ki1 = 0.3 ki10 = 0.01 ki11 = 15.0 ki12 = 6.3 ki14 = 0.2 ki15 = 0.86 ki16 = 10.0 ki17 = 10.0 ki18 = 10.0 ki2 = 30.0 ki3 = 30.0 ki4 = 0.6 ki5 = 0.1 ki6 = 0.01 ki7 = 30.0 ki8 = 4.0 ki9 = 0.175 ks = 500.0 lin = 12.0 cell = 1.0 #initial values x1 = 0.001 x10 = 0.001 x11 = 0.001 x12 = 0.001 x13 = 0.001 x14 = 0.001 x15 = 1.5 x16 = 1.5 x17 = 0.5 x18 = 0.2 x19 = 0.5 x2 = 0.001 x20 = 0.5 x21 = 5.0 x22 = 0.76 x23 = 0.07 x24 = 0.8 x25 = 0.0 x3 = 0.001 x4 = 0.001 x5 = 0.001 x6 = 0.001 x7 = 0.001 x8 = 0.001 x9 = 0.001 #assignment rules