begin name santolini1 end name begin reactions r1 {1.0}FeIII + {1.0}$NADPH = {1.0}FeII + {1.0}$NADPplus r10 {1.0}FeIINO + {1.0}$O2 = {1.0}FeIII + {1.0}$NO3 r2 {1.0}FeII + {1.0}$O2 = {1.0}FeIIO2 r3 {1.0}FeIIO2 = {1.0}FeIIIstar r4 {1.0}FeIIIstar + {0.5}$NADPH = {1.0}FeIIstar + {0.5}$NADPplus r5 {1.0}FeIIstar + {1.0}$O2 = {1.0}FeIIstarO2 r6 {1.0}FeIIstarO2 = {1.0}FeIIINO + {1.0}$citrulline r9 {1.0}FeIINO = {1.0}FeII + {1.0}$NO rF {1.0}FeIIINO = {1.0}FeIII + {1.0}$NO rG {1.0}FeIIINO + {0.5}$NADPH = {1.0}FeIINO + {0.5}$NADPplus end reactions begin rate equations r1 = cytosol*k1*FeIII[t] r10 = cytosol*k10*O2*FeIINO[t] r2 = cytosol*k2*O2*FeII[t] r3 = cytosol*k3*FeIIO2[t] r4 = cytosol*k4*FeIIIstar[t] r5 = cytosol*k5*O2*FeIIstar[t] r6 = cytosol*k6*FeIIstarO2[t] r9 = cytosol*k9*FeIINO[t] rF = cytosol*k7*FeIIINO[t] rG = cytosol*k8*FeIIINO[t] end rate equations begin parameters k1 = 2.6 k10 = 0.0013 k2 = 0.9 k3 = 26.0 k4 = 2.6 k5 = 0.9 k6 = 26.0 k7 = 5.0 k8 = 2.6 k9 = 0.0001 NADPH = 40.0 NADPplus = 0.0 NO = 0.0 NO3 = 0.0 O2 = 140.0 citrulline = 0.0 cytosol = 1.0 end parameters begin initial conditions FeII[0] = FeIIi FeIII[0] = FeIIIi FeIIINO[0] = FeIIINOi FeIIIstar[0] = FeIIIstari FeIINO[0] = FeIINOi FeIIO2[0] = FeIIO2i FeIIstar[0] = FeIIstari FeIIstarO2[0] = FeIIstarO2i end initial conditions begin initial values FeIIi = 0.0 FeIIIi = 1.0 FeIIINOi = 0.0 FeIIIstari = 0.0 FeIINOi = 0.0 FeIIO2i = 0.0 FeIIstari = 0.0 FeIIstarO2i = 0.0 end initial values begin assignment rules FeIIIt := FeIII[t] + FeIIIstar[t] end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations NO http://identifiers.org/chebi/CHEBI:16480 NO http://identifiers.org/kegg.compound/C00533 NO3 http://identifiers.org/chebi/CHEBI:17632 NO3 http://identifiers.org/kegg.compound/C00244 end species annotations begin units end units