begin name queralt1 end name begin reactions securinseparasesecurindegradation {1.0}securinseparase = {1.0}$EXTERNAL securinseparaseseparasedegradation {1.0}securinseparase = {1.0}$EXTERNAL v1 {1.0}$AA = {1.0}Clb2 v10 {1.0}separaseT = {1.0}$degr v11 {1.0}$EXTERNAL = {1.0}securinseparase v13 {1.0}$EXTERNAL = {1.0}Net1 v14 {1.0}Net1 = {1.0}$EXTERNAL v15 {1.0}Net1 = {1.0}Net1Cdc14 v16 {1.0}Net1Cdc14 = {1.0}Net1 v17 {1.0}Net1Cdc14 = {1.0}$EXTERNAL v18 {1.0}$AA = {1.0}PoloT v19 {1.0}PoloT = {1.0}$degr v2 {1.0}Clb2 = {1.0}$degr v20 {1.0}$EXTERNAL = {1.0}Polo v21 {1.0}Polo = {1.0}$EXTERNAL v22 {1.0}Polo = {1.0}$degr v23 {1.0}$EXTERNAL = {1.0}Tem1 v24 {1.0}Tem1 = {1.0}$EXTERNAL v25 {1.0}$EXTERNAL = {1.0}Cdc15 v26 {1.0}Cdc15 = {1.0}$EXTERNAL v27 {1.0}$AA = {1.0}MEN v28 {1.0}MEN = {1.0}$degr v29 {1.0}MEN = {1.0}$EXTERNAL v3 {1.0}$AA = {1.0}Cdc20 v30 {1.0}MEN = {1.0}$EXTERNAL v4 {1.0}Cdc20 = {1.0}$degr v5 {1.0}$EXTERNAL = {1.0}Cdh1 v6 {1.0}Cdh1 = {1.0}$EXTERNAL v7 {1.0}$AA = {1.0}securinT v8 {1.0}securinT = {1.0}$degr v9 {1.0}$AA = {1.0}separaseT end reactions begin rate equations securinseparasesecurindegradation = (kdsecurin + kadsecurin*Cdc20[t])*securinseparase[t] securinseparaseseparasedegradation = kdseparase*securinseparase[t] v1 = ksclb2 v10 = kdseparase*separaseT[t] v11 = lasecurin*securin*separase - ldsecurin*securinseparase[t] v13 = (Net1P*(Cdc14*kad + kd*PP2A))/(Jnet + Net1P) v14 = ((Cdk*kp + kap*MEN[t])*Net1[t])/(Jnet + Net1[t] + Net1Cdc14[t]) v15 = Cdc14*lanet*Net1[t] v16 = ldnet*Net1Cdc14[t] v17 = ((Cdk*kp + kap*MEN[t])*Net1Cdc14[t])/(Jnet + Net1[t] + Net1Cdc14[t]) v18 = kspolo v19 = (kdpolo + kadpolo*Cdh1[t])*PoloT[t] v2 = (kdclb2 + kadclb2*Cdc20[t] + kaadclb2*Cdh1[t])*Clb2[t] v20 = ((Cdk*kaapolo + kapolo)*(-Polo[t] + PoloT[t]))/(Jpolo - Polo[t] + PoloT[t]) v21 = (kipolo*Polo[t])/(Jpolo + Polo[t]) v22 = (kdpolo + kadpolo*Cdh1[t])*Polo[t] v23 = ((katem + kaatem*Polo[t])*(Tem1T - Tem1[t]))/(Jtem1 + Tem1T - Tem1[t]) v24 = ((kitem + kaitem*PP2A)*Tem1[t])/(Jtem1 + Tem1[t]) v25 = ((Cdc14*kaacdc15 + kacdc15)*(Cdc15T - Cdc15[t]))/(Cdc15T + Jcdc15 - Cdc15[t]) v26 = ((Cdk*kaicdc15 + kicdc15)*Cdc15[t])/(Jcdc15 + Cdc15[t]) v27 = lamen*(Cdc15[t] - MEN[t])*(-MEN[t] + Tem1[t]) v28 = ldmen*MEN[t] v29 = ((kitem + kaitem*PP2A)*MEN[t])/(Jtem1 + Tem1[t]) v3 = kscdc20 v30 = ((Cdk*kaicdc15 + kicdc15)*MEN[t])/(Jcdc15 + Cdc15[t]) v4 = Cdc20[t]*(kdcdc20 + kadcdc20*Cdh1[t]) v5 = ((Cdc14*kadcdh + kdcdh)*(Cdh1T - Cdh1[t]))/(Cdh1T + Jcdh - Cdh1[t]) v6 = (Cdk*kapcdh*Cdh1[t])/(Jcdh + Cdh1[t]) v7 = kssecurin v8 = (kdsecurin + kadsecurin*Cdc20[t])*securinT[t] v9 = ksseparase end rate equations begin parameters Cdc14T = 0.5 Cdc15T = 1.0 Cdh1T = 1.0 Inh = 0.0 Jcdc15 = 0.2 Jcdh = 0.0015 Jnet = 0.2 Jpolo = 0.25 Jtem1 = 0.005 Net1T = 1.0 PP2AT = 1.0 Tem1T = 1.0 kaacdc15 = 0.5 kaadclb2 = 2.0 kaapolo = 0.5 kaatem = 0.5 kacdc15 = 0.02 kad = 0.1 kadcdc20 = 2.0 kadcdh = 1.0 kadclb2 = 0.2 kadpolo = 0.25 kadsecurin = 2.0 kaicdc15 = 0.2 kaitem = 1.0 kap = 2.0 kapcdh = 1.0 kapolo = 0.0 katem = 0.0 kd = 0.45 kdcdc20 = 0.05 kdcdh = 0.01 kdclb2 = 0.03 kdpolo = 0.01 kdsecurin = 0.05 kdseparase = 0.004 ki = 20.0 kicdc15 = 0.0 kipolo = 0.1 kitem = 0.1 kp = 0.4 kpp = 0.1 kscdc20 = 0.015 ksclb2 = 0.03 kspolo = 0.01 kssecurin = 0.03 ksseparase = 0.001 lamen = 10.0 lanet = 500.0 lasecurin = 500.0 ldmen = 0.1 ldnet = 1.0 ldsecurin = 1.0 AA = 1.0 degr = 1.0 compartment = 1.0 end parameters begin initial conditions Cdc15[0] = Cdc15i Cdc20[0] = Cdc20i Cdh1[0] = Cdh1i Clb2[0] = Clb2i MEN[0] = MENi Net1[0] = Net1i Net1Cdc14[0] = Net1Cdc14i Polo[0] = Poloi PoloT[0] = PoloTi Tem1[0] = Tem1i securinT[0] = securinTi securinseparase[0] = securinseparasei separaseT[0] = separaseTi end initial conditions begin initial values Cdc15i = 0.0257 Cdc20i = 0.0 Cdh1i = 3.8e-05 Clb2i = 0.997 MENi = 8e-06 Net1i = 0.098 Net1Cdc14i = 0.485 Poloi = 0.945 PoloTi = 0.99 Tem1i = 0.00389 securinTi = 0.6 securinseparasei = 0.248 separaseTi = 0.25 end initial values begin assignment rules PP2A := (PP2AT*(1 + ki*kpp*separase))/(1 + ki*separase) Cdc15i := Cdc15T - Cdc15[t] Cdc14 := Cdc14T - Net1Cdc14[t] Net1P := Net1T - Net1[t] - Net1Cdc14[t] Cdk := Clb2[t]/(1 + Inh) Poloi := -Polo[t] + PoloT[t] securin := -securinseparase[t] + securinT[t] Tem1i := Tem1T - Tem1[t] Cdh1i := Cdh1T - Cdh1[t] separase := -securinseparase[t] + separaseT[t] end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units