begin name kowald1 end name begin reactions fast {1.0}species0000001 = {1.0}$EXTERNAL reaction0 {1.0}species0000001 + {1.0}species0000002 = {1.0}$EXTERNAL reaction0000001 {1.0}$EXTERNAL = {1.0}species0000001 reaction1 {1.0}species0000001 = {1.0}species0000006 + {1.0}species0000002 reaction10 {1.0}$EXTERNAL = {1.0}species0000002 reaction11 {1.0}species0000002 = {1.0}$EXTERNAL reaction12 {1.0}species0000011 = {1.0}species0000007 reaction13 {1.0}species0000007 = {1.0}species0000011 + {1.0}species0000009 reaction14 {2.0}species0000007 = {1.0}$EXTERNAL reaction2 {1.0}species0000001 + {1.0}species0000007 = {1.0}species0000009 reaction3 {1.0}species0000001 + {1.0}species0000006 = {2.0}species0000008 reaction4 {1.0}species0000006 = {2.0}species0000008 reaction5 {1.0}species0000006 = {1.0}$EXTERNAL reaction6 {1.0}species0000008 = {1.0}$EXTERNAL reaction7 {1.0}$EXTERNAL = {1.0}species0000011 + {1.0}species0000006 reaction8 {1.0}species0000008 = {1.0}species0000011 reaction9 {1.0}species0000009 = {1.0}$EXTERNAL end reactions begin rate equations fast = compartment0000001*HO2star*k10 reaction0 = compartment0000001*k2*species0000001[t]*species0000002[t] reaction0000001 = compartment0000001*k1 reaction1 = compartment0000001*CuIZnSOD*k3*species0000001[t] reaction10 = compartment0000001*CuIZnSOD*k13a reaction11 = compartment0000001*k13b*species0000002[t] reaction12 = compartment0000001*k17*species0000011[t] reaction13 = compartment0000001*k18*species0000007[t] reaction14 = compartment0000001*k19*species0000007[t]^2 reaction2 = compartment0000001*k4*species0000001[t]*species0000007[t] reaction3 = compartment0000001*k5*species0000001[t]*species0000006[t] reaction4 = compartment0000001*k6*species0000002[t]*species0000006[t] reaction5 = compartment0000001*k7*species0000006[t]*species0000017[t] reaction6 = compartment0000001*k9*species0000008[t] reaction7 = compartment0000001*HO2star*k10 reaction8 = compartment0000001*k11*species0000008[t] reaction9 = compartment0000001*k12*species0000009[t] end rate equations begin parameters k1 = "6.6e-07" k10 = 1000.0 k11 = 250000000.0 k12 = 0.38 k13a = 0.0087 k13b = 0.0087 k17 = 30000.0 k18 = 7.0 k19 = 88000.0 k2 = 1600000000.0 k3 = 1600000000.0 k4 = 100000.0 k5 = 20000.0 k6 = 1.0 k7 = 34000000.0 k9 = 1000000.0 compartment0000001 = 1.0 end parameters begin initial conditions species0000001[0] = species0000001i species0000002[0] = species0000002i species0000006[0] = species0000006i species0000007[0] = species0000007i species0000008[0] = species0000008i species0000009[0] = species0000009i species0000011[0] = species0000011i species0000016[0] = species0000016i species0000017[0] = species0000017i end initial conditions begin initial values species0000001i = 0.0 species0000002i = 5e-06 species0000006i = 0.0 species0000007i = 0.0 species0000008i = 0.0 species0000009i = 0.0 species0000011i = 0.0 species0000016i = 1e-05 species0000017i = 1e-05 end initial values begin assignment rules CuIZnSOD := -species0000002[t] + species0000016[t] HO2star := species0000001[t]/100 end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations species_0000001 http://identifiers.org/chebi/CHEBI:18421 species_0000001 http://identifiers.org/kegg.compound/C00704 species_0000006 http://identifiers.org/chebi/CHEBI:16240 species_0000006 http://identifiers.org/kegg.compound/C00027 species_0000008 http://identifiers.org/chebi/CHEBI:29191 species_0000009 http://identifiers.org/kegg.compound/C01025 species_0000009 http://identifiers.org/chebi/CHEBI:61051 end species annotations begin units end units