begin name kofahl1 end name begin reactions v1 {1.0}alpha = {1.0}$p v10 {1.0}Gbc + {1.0}complexC = {1.0}complexD v11 {1.0}complexD = {1.0}Gbc + {1.0}complexC v12 {1.0}Ste5 + {1.0}Ste11 = {1.0}complexA v13 {1.0}complexA = {1.0}Ste5 + {1.0}Ste11 v14 {1.0}Ste7 + {1.0}Fus3 = {1.0}complexB v15 {1.0}complexB = {1.0}Ste7 + {1.0}Fus3 v16 {1.0}complexA + {1.0}complexB = {1.0}complexC v17 {1.0}complexC = {1.0}Ste11 + {1.0}Ste5 + {1.0}Ste7 + {1.0}Fus3 v18 {1.0}complexD + {1.0}Ste20 = {1.0}complexE v19 {1.0}complexE = {1.0}complexD + {1.0}Ste20 v2 {1.0}Ste2 = {1.0}Ste2a v20 {1.0}complexE = {1.0}complexF v21 {1.0}complexE = {1.0}Gbc + {1.0}Ste5 + {1.0}Ste11 + {1.0}Ste7 + {1.0}Fus3 + {1.0}Ste20 v22 {1.0}complexF = {1.0}complexG v23 {1.0}complexF = {1.0}Gbc + {1.0}Ste5 + {1.0}Ste11 + {1.0}Ste7 + {1.0}Fus3 + {1.0}Ste20 v24 {1.0}complexG = {1.0}complexH v25 {1.0}complexG = {1.0}Gbc + {1.0}Ste5 + {1.0}Ste11 + {1.0}Ste7 + {1.0}Fus3 + {1.0}Ste20 v26 {1.0}complexH = {1.0}complexI v27 {1.0}complexH = {1.0}Gbc + {1.0}Ste5 + {1.0}Ste11 + {1.0}Ste7 + {1.0}Fus3 + {1.0}Ste20 v28 {1.0}complexI = {1.0}complexL + {1.0}Fus3PP v29 {1.0}complexL + {1.0}Fus3 = {1.0}complexK v3 {1.0}Ste2a = {1.0}Ste2 v30 {1.0}complexK = {1.0}Fus3 + {1.0}complexL v31 {1.0}complexK = {1.0}complexI v32 {1.0}complexL = {1.0}Gbc + {1.0}Ste5 + {1.0}Ste11 + {1.0}Ste7 + {1.0}Ste20 v33 {1.0}Fus3PP = {1.0}Fus3 v34 {1.0}Ste12 + {1.0}Fus3PP = {1.0}Ste12a v35 {1.0}Ste12a = {1.0}Ste12 + {1.0}Fus3PP v36 {1.0}Bar1 = {1.0}Bar1a v37 {1.0}Bar1a = {1.0}Bar1 v38 {1.0}Bar1a = {1.0}Bar1aex v39 {1.0}Far1 = {1.0}Far1PP v4 {1.0}Ste2a = {1.0}$p v40 {1.0}Far1PP = {1.0}Far1 v41 {1.0}Far1 = {1.0}Far1U v42 {1.0}Far1PP + {1.0}Gbc = {1.0}complexM v43 {1.0}complexM = {1.0}Gbc + {1.0}Far1PP v44 {1.0}complexN = {1.0}Cdc28 + {1.0}Far1PP v45 {1.0}Cdc28 + {1.0}Far1PP = {1.0}complexN v46 {1.0}$p = {1.0}Sst2 v47 {1.0}Sst2 = {1.0}$p v5 {1.0}Ste2 = {1.0}$p v6 {1.0}Gabc = {1.0}GaGTP + {1.0}Gbc v7 {1.0}GaGTP = {1.0}GaGDP v8 {1.0}GaGTP = {1.0}GaGDP v9 {1.0}GaGDP + {1.0}Gbc = {1.0}Gabc end reactions begin rate equations v1 = k1*alpha[t]*Bar1aex[t] v10 = k10*complexC[t]*Gbc[t] v11 = k11*complexD[t] v12 = k12*Ste11[t]*Ste5[t] v13 = k13*complexA[t] v14 = k14*Fus3[t]*Ste7[t] v15 = k15*complexB[t] v16 = k16*complexA[t]*complexB[t] v17 = k17*complexC[t] v18 = k18*complexD[t]*Ste20[t] v19 = k19*complexE[t] v2 = k2*alpha[t]*Ste2[t] v20 = k20*complexE[t] v21 = k21*complexE[t] v22 = k22*complexF[t] v23 = k23*complexF[t] v24 = k24*complexG[t] v25 = k25*complexG[t] v26 = k26*complexH[t] v27 = k27*complexH[t] v28 = k28*complexI[t] v29 = k29*complexL[t]*Fus3[t] v3 = k3*Ste2a[t] v30 = k30*complexK[t] v31 = k31*complexK[t] v32 = k32*complexL[t] v33 = k33*Fus3PP[t] v34 = k34*Fus3PP[t]*Ste12[t] v35 = k35*Ste12a[t] v36 = k36*Bar1[t]*Ste12a[t] v37 = k37*Bar1a[t] v38 = k38*Bar1a[t] v39 = (k39*Far1[t]*Fus3PP[t]^2)/(10000 + Fus3PP[t]^2) v4 = k4*Ste2a[t] v40 = k40*Far1PP[t] v41 = k41*Cdc28[t]*Far1[t] v42 = k42*Far1PP[t]*Gbc[t] v43 = k43*complexM[t] v44 = k44*complexN[t] v45 = k45*Cdc28[t]*Far1PP[t] v46 = (k46*Fus3PP[t]^2)/(16 + Fus3PP[t]^2) v47 = k47*Sst2[t] v5 = k5*Ste2[t] v6 = k6*Gabc[t]*Ste2a[t] v7 = k7*GaGTP[t] v8 = k8*GaGTP[t]*Sst2[t] v9 = k9*GaGDP[t]*Gbc[t] end rate equations begin parameters k1 = 0.03 k10 = 0.1 k11 = 5.0 k12 = 1.0 k13 = 3.0 k14 = 1.0 k15 = 3.0 k16 = 3.0 k17 = 100.0 k18 = 5.0 k19 = 1.0 k2 = 0.0012 k20 = 10.0 k21 = 5.0 k22 = 47.0 k23 = 5.0 k24 = 345.0 k25 = 5.0 k26 = 50.0 k27 = 5.0 k28 = 140.0 k29 = 10.0 k3 = 0.6 k30 = 1.0 k31 = 250.0 k32 = 5.0 k33 = 50.0 k34 = 18.0 k35 = 10.0 k36 = 0.1 k37 = 0.1 k38 = 0.01 k39 = 18.0 k4 = 0.24 k40 = 1.0 k41 = 0.02 k42 = 0.1 k43 = 0.01 k44 = 0.01 k45 = 0.1 k46 = 200.0 k47 = 1.0 k5 = 0.024 k6 = 0.0036 k7 = 0.24 k8 = 0.033 k9 = 2000.0 p = 0.0 defaultcompartment = 1.0 end parameters begin initial conditions Bar1[0] = Bar1i Bar1a[0] = Bar1ai Bar1aex[0] = Bar1aexi Cdc28[0] = Cdc28i Far1[0] = Far1i Far1PP[0] = Far1PPi Far1U[0] = Far1Ui Fus3[0] = Fus3i Fus3PP[0] = Fus3PPi GaGDP[0] = GaGDPi GaGTP[0] = GaGTPi Gabc[0] = Gabci Gbc[0] = Gbci Sst2[0] = Sst2i Ste11[0] = Ste11i Ste12[0] = Ste12i Ste12a[0] = Ste12ai Ste2[0] = Ste2i Ste20[0] = Ste20i Ste2a[0] = Ste2ai Ste5[0] = Ste5i Ste7[0] = Ste7i alpha[0] = alphai complexA[0] = complexAi complexB[0] = complexBi complexC[0] = complexCi complexD[0] = complexDi complexE[0] = complexEi complexF[0] = complexFi complexG[0] = complexGi complexH[0] = complexHi complexI[0] = complexIi complexK[0] = complexKi complexL[0] = complexLi complexM[0] = complexMi complexN[0] = complexNi end initial conditions begin initial values Bar1i = 200.0 Bar1ai = 0.0 Bar1aexi = 0.0 Cdc28i = 300.0 Far1i = 500.0 Far1PPi = 0.0 Far1Ui = 0.0 Fus3i = 686.399701640513 Fus3PPi = 0.0 GaGDPi = 0.0 GaGTPi = 0.0 Gabci = 1666.6666667 Gbci = 0.0 Sst2i = 0.0 Ste11i = 158.33176608789 Ste12i = 200.0 Ste12ai = 0.0 Ste2i = 1666.6666667 Ste20i = 1000.0 Ste2ai = 0.0 Ste5i = 158.33176608789 Ste7i = 36.3997016405141 alphai = 100.0 complexAi = 105.943298120207 complexBi = 77.8753625675829 complexCi = 235.724935791903 complexDi = 0.0 complexEi = 0.0 complexFi = 0.0 complexGi = 0.0 complexHi = 0.0 complexIi = 0.0 complexKi = 0.0 complexLi = 0.0 complexMi = 0.0 complexNi = 0.0 end initial values begin assignment rules end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units