#kallenberger3 #reactions reaction_1: {1.0}FADD = {1.0}DISC kon_FADD * CD95act * FADD * cell reaction_10: {1.0}DISCp55 = {1.0}p43 kD374 * DISCp55 * cell reaction_11: {1.0}DISCp55 = {1.0}p43 kD374trans_p55 * DISCp55 * (DISCp55 + p30) * cell reaction_12: {1.0}DISCp55 = {1.0}p43 kD374trans_p43 * DISCp55 * p43 * cell reaction_13: {1.0}p30 = {1.0}p18 + {1.0}DISC kD374 * p30 * cell reaction_14: {1.0}p30 = {1.0}p18 + {1.0}DISC kD374trans_p55 * p30 * (DISCp55 + p30) * cell reaction_15: {1.0}p30 = {1.0}p18 + {1.0}DISC kD374trans_p43 * p30 * p43 * cell reaction_16: {1.0}p18 = {1.0}p18inactive kdiss_p18 * p18 * cell reaction_17: {1.0}Bid = {1.0}tBid kBid * Bid * (p43 + p18) * cell reaction_18: {1.0}PrNES_mCherry = {1.0}PrNES + {1.0}mCherry kD374probe * PrNES_mCherry * (p43 + p18) * cell reaction_19: {1.0}PrER_mGFP = {1.0}PrER + {1.0}mGFP kD374probe * PrER_mGFP * p18 * cell reaction_2: {1.0}DISC = {1.0}FADD koff_FADD * DISC * cell reaction_3: {1.0}p55free + {1.0}DISC = {1.0}DISCp55 kDISC * p55free * DISC * cell reaction_4: {1.0}DISCp55 = {1.0}p30 kD216 * DISCp55 * cell reaction_5: {1.0}DISCp55 = {1.0}p30 kD216trans_p55 * DISCp55 * (DISCp55 + p30) * cell reaction_6: {1.0}DISCp55 = {1.0}p30 kD216trans_p43 * DISCp55 * p43 * cell reaction_7: {1.0}p43 = {1.0}p18 + {1.0}DISC kD216 * p43 * cell reaction_8: {1.0}p43 = {1.0}p18 + {1.0}DISC kD216trans_p55 * p43 * (DISCp55 + p30) * cell reaction_9: {1.0}p43 = {1.0}p18 + {1.0}DISC kD216trans_p43 * p43 * p43 * cell #parameters KDL = 30.0060394758199 KDR = 57.2050013008496 kBid = 0.00052134055139547 kD216 = 0.00639775937416746 kD216trans_p43 = 5.29906975294056e-05 kD216trans_p55 = 0.000223246421372882 kD374 = 0.000644612643975149 kD374probe = 0.00153710001025539 kD374trans_p43 = 0.00413530054938906 kD374trans_p55 = 0.000543518631342483 kDISC = 0.000364965874405544 kdiss_p18 = 0.064713651554491 koff_FADD = 0.00130854998177646 kon_FADD = 0.00108871858684363 cell = 1.0 #initial values Bid = 236.0 CD95 = 116.0 CD95L = 16.6 DISC = 0.0 DISCp55 = 0.0 FADD = 93.0 PrER = 0.0 PrER_mGFP = 5178.0 PrNES = 0.0 PrNES_mCherry = 973.0 mCherry = 0.0 mGFP = 0.0 p18 = 0.0 p18inactive = 0.0 p30 = 0.0 p43 = 0.0 p55free = 155.0 tBid = 0.0 #assignment rules !F CD95act = pow(CD95, 3.0) * pow(KDL, 2.0) * CD95L / ((CD95L + KDL) * (pow(CD95, 2.0) * pow(KDL, 2.0) + KDR * pow(CD95L, 2.0) + 2.0 * KDR * KDL * CD95L + KDR * pow(KDL, 2.0)))