#kallenberger2 #reactions reaction_1: {1.0}FADD = {1.0}DISC kon_FADD * CD95act * FADD * cell reaction_10: {1.0}p18 = {1.0}p18inactive kdiss_p18 * p18 * cell reaction_11: {1.0}Bid = {1.0}tBid kBid * Bid * (p43 + p18) * cell reaction_12: {1.0}PrNES_mCherry = {1.0}PrNES + {1.0}mCherry kD374probe * PrNES_mCherry * (p43 + p18) * cell reaction_13: {1.0}PrER_mGFP = {1.0}PrER + {1.0}mGFP kD374probe * PrER_mGFP * p18 * cell reaction_2: {1.0}DISC = {1.0}FADD koff_FADD * DISC * cell reaction_3: {1.0}p55free + {1.0}DISC = {1.0}DISCp55 kDISC * p55free * DISC * cell reaction_4: {1.0}DISCp55 = {1.0}p30 kD216 * DISCp55 * cell reaction_5: {1.0}p43 = {1.0}p18 + {1.0}DISC kD216 * p43 * cell reaction_6: {1.0}DISCp55 = {1.0}p43 kD374trans_p55 * DISCp55 * (DISCp55 + p30) * cell reaction_7: {1.0}DISCp55 = {1.0}p43 kD374trans_p43 * DISCp55 * p43 * cell reaction_8: {1.0}p30 = {1.0}p18 + {1.0}DISC kD374trans_p55 * p30 * (DISCp55 + p30) * cell reaction_9: {1.0}p30 = {1.0}p18 + {1.0}DISC kD374trans_p43 * p30 * p43 * cell #parameters KDL = 15.421878766215 KDR = 8.98496674617627 kBid = 0.00052867403363568 kD216 = 0.0114186392006403 kD374probe = 0.00152252549827479 kD374trans_p43 = 0.00343995957326369 kD374trans_p55 = 0.000446994772958953 kDISC = 0.000491828591049766 kdiss_p18 = 0.0949914492651531 koff_FADD = 0.00566528253772301 kon_FADD = 0.000811711012144556 cell = 1.0 #initial values Bid = 224.0 CD95 = 12.0 CD95L = 16.6 DISC = 0.0 DISCp55 = 0.0 FADD = 90.0 PrER = 0.0 PrER_mGFP = 3316.0 PrNES = 0.0 PrNES_mCherry = 1909.0 mCherry = 0.0 mGFP = 0.0 p18 = 0.0 p18inactive = 0.0 p30 = 0.0 p43 = 0.0 p55free = 127.0 tBid = 0.0 #assignment rules !F CD95act = pow(CD95, 3.0) * pow(KDL, 2.0) * CD95L / ((CD95L + KDL) * (pow(CD95, 2.0) * pow(KDL, 2.0) + KDR * pow(CD95L, 2.0) + 2.0 * KDR * KDL * CD95L + KDR * pow(KDL, 2.0)))