begin name heldt1 end name begin reactions reaction1 {1.0}species3 + {1.0}species1 = {1.0}species2 reaction10 {1.0}species12 + {71.0}species13 = {1.0}species17 reaction11 {1.0}species9 + {8.5}species14 = {1.0}species15 reaction12 {1.0}species15 + {1.0}species31 = {1.0}species16 reaction13 {1.0}species17 = {1.0}species17 + {1.0}species18 reaction14 {1.0}species18 + {1.0}species11 = {1.0}species19 reaction15 {1.0}species19 + {71.0}species13 = {1.0}species9 reaction16 {1.0}species9 = {1.0}species9 + {1.0}species20 reaction17 {1.0}species9 = {1.0}species9 + {1.0}species21 reaction18 {1.0}species9 = {1.0}species9 + {1.0}species22 reaction19 {1.0}species9 = {1.0}species9 + {1.0}species23 reaction2 {1.0}species3 + {1.0}species4 = {1.0}species5 reaction20 {1.0}species9 = {1.0}species9 + {1.0}species24 reaction21 {1.0}species9 = {1.0}species9 + {1.0}species25 reaction22 {1.0}species9 = {1.0}species9 + {1.0}species26 reaction23 {1.0}species9 = {1.0}species9 + {1.0}species27 reaction24 {1.0}species21 = {1.0}species21 + {1.0}species28 reaction25 {1.0}species20 = {1.0}species20 + {1.0}species29 reaction26 {1.0}species22 = {1.0}species22 + {1.0}species30 reaction27 {1.0}species28 + {1.0}species29 + {1.0}species30 = {1.0}species11 reaction28 {1.0}species24 = {1.0}species24 + {1.0}species13 reaction29 {1.0}species26 = {1.0}species26 + {1.0}species14 reaction3 {1.0}species2 = {1.0}species6 + {1.0}species1 reaction30 {1.0}species27 = {1.0}species27 + {1.0}species31 reaction31 {1.0}species23 = {1.0}species23 + {1.0}species32 reaction32 {1.0}species25 = {1.0}species25 + {1.0}species33 reaction33 {1.0}species26 = {1.0}species26 + {1.0}species34 reaction34 {8.0}species16 + {37.0}species11 + {433.0}species13 + {2932.0}species14 + {157.0}species31 + {500.0}species32 + {100.0}species33 + {40.0}species34 = {1.0}species35 reaction35 {1.0}species9 = {1.0}$EXTERNAL reaction36 {1.0}species10 = {1.0}$EXTERNAL reaction37 {1.0}species18 = {1.0}$EXTERNAL reaction38 {1.0}species12 = {1.0}$EXTERNAL reaction39 {1.0}species19 = {1.0}$EXTERNAL reaction4 {1.0}species5 = {1.0}species6 + {1.0}species4 reaction40 {1.0}species17 = {1.0}$EXTERNAL reaction41 {1.0}species15 = {1.0}$EXTERNAL reaction42 {1.0}species16 = {1.0}$EXTERNAL reaction43 {1.0}species20 = {1.0}$EXTERNAL reaction44 {1.0}species21 = {1.0}$EXTERNAL reaction45 {1.0}species22 = {1.0}$EXTERNAL reaction46 {1.0}species23 = {1.0}$EXTERNAL reaction47 {1.0}species24 = {1.0}$EXTERNAL reaction48 {1.0}species25 = {1.0}$EXTERNAL reaction49 {1.0}species26 = {1.0}$EXTERNAL reaction5 {1.0}species6 = {1.0}species7 + {8.0}species8 reaction50 {1.0}species27 = {1.0}$EXTERNAL reaction6 {1.0}species6 = {1.0}$EXTERNAL reaction7 {1.0}species8 = {1.0}species9 reaction8 {1.0}species9 = {1.0}species9 + {1.0}species10 reaction9 {1.0}species10 + {1.0}species11 = {1.0}species12 end reactions begin rate equations reaction1 = compartment1*(-(parameter3*species2[t]) + parameter1*species1[t]*species3[t]) reaction10 = compartment1*function1[parameter13, species12[t], species13[t]] reaction11 = compartment1*function1[parameter14, species9[t], species14[t]] reaction12 = compartment1*parameter15*species15[t]*species31[t] reaction13 = compartment1*parameter10*species17[t] reaction14 = compartment1*parameter12*species11[t]*species18[t] reaction15 = compartment1*function1[parameter13, species19[t], species13[t]] reaction16 = compartment1*parameter39*species9[t] reaction17 = compartment1*parameter40*species9[t] reaction18 = compartment1*parameter41*species9[t] reaction19 = compartment1*parameter42*species9[t] reaction2 = compartment1*(parameter2*species3[t]*species4[t] - parameter4*species5[t]) reaction20 = compartment1*parameter43*species9[t] reaction21 = compartment1*parameter44*species9[t] reaction22 = compartment1*parameter45*species9[t] reaction23 = compartment1*parameter46*species9[t] reaction24 = compartment1*parameter16*species21[t] reaction25 = compartment1*parameter16*species20[t] reaction26 = compartment1*parameter16*species22[t] reaction27 = compartment1*parameter17*species28[t]*species29[t]*species30[t] reaction28 = compartment1*parameter16*species24[t] reaction29 = compartment1*parameter27*species26[t] reaction3 = compartment1*parameter5*species2[t] reaction30 = compartment1*parameter29*species27[t] reaction31 = compartment1*parameter16*species23[t] reaction32 = compartment1*parameter16*species25[t] reaction33 = compartment1*parameter28*species26[t] reaction34 = compartment1*function2[parameter18, species16[t], species11[t], reaction34KmB, species32[t], reaction34KmC, species13[t], reaction34KmD, species33[t], reaction34KmE, species14[t], reaction34KmF, species34[t], reaction34KmG, species31[t], reaction34KmH] reaction35 = compartment1*parameter20*species9[t] reaction36 = compartment1*parameter19*species10[t] reaction37 = compartment1*parameter19*species18[t] reaction38 = compartment1*parameter22*species12[t] reaction39 = compartment1*parameter22*species19[t] reaction4 = compartment1*parameter5*species5[t] reaction40 = compartment1*parameter20*species17[t] reaction41 = compartment1*parameter20*species15[t] reaction42 = compartment1*parameter20*species16[t] reaction43 = compartment1*parameter21*species20[t] reaction44 = compartment1*parameter21*species21[t] reaction45 = compartment1*parameter21*species22[t] reaction46 = compartment1*parameter21*species23[t] reaction47 = compartment1*parameter21*species24[t] reaction48 = compartment1*parameter21*species25[t] reaction49 = compartment1*parameter21*species26[t] reaction5 = compartment1*parameter6*species6[t] reaction50 = compartment1*parameter21*species27[t] reaction6 = compartment1*parameter7*species6[t] reaction7 = compartment1*parameter8*species8[t] reaction8 = compartment1*parameter11*species9[t] reaction9 = compartment1*parameter12*species10[t]*species11[t] end rate equations begin parameters parameter1 = 0.0809 parameter10 = 13.86 parameter11 = 1.38 parameter12 = 1.0 parameter13 = 0.000301 parameter14 = "1.39e-06" parameter15 = "1e-06" parameter17 = 1.0 parameter18 = 0.0037 parameter19 = 36.36 parameter2 = 0.000455 parameter20 = 0.09 parameter21 = 0.33 parameter22 = 4.25 parameter23 = 0.51 parameter24 = 160.0 parameter25 = 0.02 parameter26 = 0.125 parameter30 = 2320.0 parameter31 = 2320.0 parameter32 = 2211.0 parameter33 = 1757.0 parameter34 = 1540.0 parameter35 = 1392.0 parameter36 = 1005.0 parameter37 = 868.0 parameter38 = 250000.0 parameter47 = 0.0113 parameter48 = "8.33e-05" parameter5 = 4.8 parameter6 = 3.21 parameter8 = 6.0 parameter9 = 64800.0 reaction34KmB = 450.0 reaction34KmC = 5000.0 reaction34KmD = 10000.0 reaction34KmE = 1000.0 reaction34KmF = 30000.0 reaction34KmG = 400.0 reaction34KmH = 1650.0 compartment1 = 1.0 end parameters begin initial conditions species1[0] = species1i species10[0] = species10i species11[0] = species11i species12[0] = species12i species13[0] = species13i species14[0] = species14i species15[0] = species15i species16[0] = species16i species17[0] = species17i species18[0] = species18i species19[0] = species19i species2[0] = species2i species20[0] = species20i species21[0] = species21i species22[0] = species22i species23[0] = species23i species24[0] = species24i species25[0] = species25i species26[0] = species26i species27[0] = species27i species28[0] = species28i species29[0] = species29i species3[0] = species3i species30[0] = species30i species31[0] = species31i species32[0] = species32i species33[0] = species33i species34[0] = species34i species35[0] = species35i species4[0] = species4i species5[0] = species5i species6[0] = species6i species7[0] = species7i species8[0] = species8i species9[0] = species9i end initial conditions begin initial values species1i = 150.0 species10i = 0.0 species11i = 0.0 species12i = 0.0 species13i = 0.0 species14i = 0.0 species15i = 0.0 species16i = 0.0 species17i = 0.0 species18i = 0.0 species19i = 0.0 species2i = 0.0 species20i = 0.0 species21i = 0.0 species22i = 0.0 species23i = 0.0 species24i = 0.0 species25i = 0.0 species26i = 0.0 species27i = 0.0 species28i = 0.0 species29i = 0.0 species3i = 10.0 species30i = 0.0 species31i = 0.0 species32i = 0.0 species33i = 0.0 species34i = 0.0 species35i = 0.0 species4i = 1000.0 species5i = 0.0 species6i = 0.0 species7i = 0.0 species8i = 0.0 species9i = 0.0 end initial values begin assignment rules parameter7 := ((1 - parameter23)*parameter6)/parameter23 parameter4 := parameter2/parameter48 parameter3 := parameter1/parameter47 parameter16 := parameter9/parameter24 species37 := species36/8 species39 := species38/8 species36 := species10[t] + species12[t] + species17[t] species38 := species15[t] + species16[t] + species18[t] + species19[t] + 8*(species2[t] + species5[t] + species6[t]) + species8[t] + species9[t] parameter45 := parameter38/(8*parameter36) parameter29 := (parameter26*parameter9)/parameter24 parameter28 := (parameter25*parameter9)/parameter24 parameter42 := parameter38/(8*parameter33) parameter39 := parameter38/(8*parameter30) parameter41 := parameter38/(8*parameter32) parameter40 := parameter38/(8*parameter31) parameter46 := parameter38/(8*parameter37) parameter27 := ((1 - parameter25)*parameter9)/parameter24 parameter44 := parameter38/(8*parameter35) parameter43 := parameter38/(8*parameter34) end assignment rules begin function definitions function2[k_,substrateA_,substrateB_,KmB_,substrateC_,KmC_,substrateD_,KmD_,substrateE_,KmE_,substrateF_,KmF_,substrateG_,KmG_,substrateH_,KmH_] := (k*substrateA*substrateB*substrateC*substrateD*substrateE*substrateF*substrateG*substrateH)/((KmB + substrateB)*(KmC + substrateC)*(KmD + substrateD)*(KmE + substrateE)*(KmF + substrateF)*(KmG + substrateG)*(KmH + substrateH)) function1[k_,substratea_,substrateb_] := k*substratea*substrateb end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units