begin name figueiredo1 end name begin reactions v1 {1.0}erk = {1.0}erkp v10 {1.0}X2 = {1.0}X1 + {1.0}Ap v11 {1.0}$extVar = {1.0}IL10m v12 {1.0}IL10m = {1.0}$extVar v13 {1.0}$extVar = {1.0}IL10i v14 {1.0}IL10i = {1.0}$extVar v15 {1.0}IL10i = {1.0}IL10e v16 {1.0}IL10e = {1.0}$extVar v2 {1.0}erkp = {1.0}erk v3 {1.0}p38 = {1.0}p38p v4 {1.0}p38p = {1.0}p38 v5 {1.0}A = {1.0}Ap v6 {1.0}Ap = {1.0}A v7 {1.0}X0 = {1.0}X1 v8 {1.0}X1 = {1.0}X0 v9 {1.0}X1 + {1.0}Ap = {1.0}X2 end reactions begin rate equations v1 = function1[k, stimulus, erk[t]] v10 = k19*X2[t] v11 = function2[k10, X2[t]] v12 = k111*IL10m[t] v13 = function2[k12, IL10m[t]] v14 = k113*IL10i[t] v15 = k114*IL10i[t] v16 = k115*IL10e[t] v2 = k1*erkp[t] v3 = function1[k2, stimulus, p38[t]] v4 = k13*p38p[t] v5 = function1[k4, p38p[t], A[t]] v6 = k15*Ap[t] v7 = function1[k6, erkp[t], X0[t]] v8 = k17*X1[t] v9 = k18*Ap[t]*X1[t] end rate equations begin parameters k = 99.2692 k1 = 0.1 k10 = 0.0372056 k111 = 1.0 k113 = 0.00178625 k114 = 1.13928 k115 = 1.13709 k12 = 2.39137 k13 = 1.64959 k15 = 0.0322928 k17 = 0.175939 k18 = 99.7689 k19 = 2.64996 k2 = 99.7742 k4 = 99.9658 k6 = 99.934 parameter1 = 0.006389035 parameter2 = 0.044448794 parameter3 = 0.001282198 stimulus = 1.0 extVar = 0.0 default = 1.0 end parameters begin initial conditions A[0] = Ai Ap[0] = Api IL10e[0] = IL10ei IL10i[0] = IL10ii IL10m[0] = IL10mi X0[0] = X0i X1[0] = X1i X2[0] = X2i erk[0] = erki erkp[0] = erkpi p38[0] = p38i p38p[0] = p38pi end initial conditions begin initial values Ai = 10.0 Api = 0.0 IL10ei = 0.0 IL10ii = 0.0 IL10mi = 0.0 X0i = 10.0 X1i = 0.0 X2i = 0.0 erki = 2.0 erkpi = 0.0 p38i = 2.0 p38pi = 0.0 end initial values begin assignment rules end assignment rules begin function definitions function2[k_,Mvar_] := k*Mvar function1[k_,Mvar_,S_] := k*Mvar*S end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units