begin name
clancy1
end name

begin reactions
reaction0000001 {1.0}c3 = {1.0}c2
reaction0000002 {1.0}c2 = {1.0}c1
reaction0000003 {1.0}c1 = {1.0}o
reaction0000004 {1.0}o = {1.0}i
reaction0000005 {1.0}c1 = {1.0}i
end reactions

begin rate equations
reaction0000001 = cell*(-(b*c2[t]) + a*c3[t])
reaction0000002 = cell*(-(bin*c1[t]) + ain*c2[t])
reaction0000003 = cell*(aa*c1[t] - bb*o[t])
reaction0000004 = cell*(-(ai*i[t]) + bi*o[t])
reaction0000005 = cell*(aa*c1[t] - u*i[t])
end rate equations

begin parameters
F = 96.485
R = 8.314
Temp = 310.0
ain = 2.172
bin = 1.077
ki = 140.0
ko = 5.4
vhold = -40.0
vtest = 0.0
cell = 1.0
end parameters

begin initial conditions
c1[0] = c1i
c2[0] = c2i
c3[0] = c3i
i[0] = ii
o[0] = oi
end initial conditions

begin initial values
c1i = 0.0
c2i = 0.0
c3i = 1.0
ii = 0.0
oi = 0.06
end initial values

begin assignment rules
aa := 0.0655*E^(0.05547153*(-36 + v))
ik := Gk*(v - vk)*o[t]
a := 0.0555*E^(0.05547153*(-12 + v))
b := 0.002357/E^(0.036588*v)
Gk := 0.0135*ko^0.59
bi := 1.03007202707417*E^(0.000942*v)*(ko^(-1))^0.3
u := (ai*bb)/bi
bb := 0.0029357/E^(0.02158*v)
vk := (R*Temp*Log[ko/ki])/F
ai := 1.9755/(E^(0.02352*(25 + v))*ko)
v := Piecewise[{{vtest, 50 < t && t <= 300}}, vhold]
end assignment rules

begin function definitions
end function definitions

begin events
end events

begin process annotations
end process annotations

begin species annotations
end species annotations

begin units
end units