begin name chassagnole3 end name begin reactions v1 {1.0}$asp + {1.0}$atp = {1.0}aspp + {1.0}$adp v2 {1.0}aspp + {1.0}$nadph = {1.0}asa + {1.0}$nadp + {1.0}$pi v3 {1.0}asa + {1.0}$nadph = {1.0}hs + {1.0}$nadp v4 {1.0}hs + {1.0}$atp = {1.0}hsp + {1.0}$adp v5 {1.0}hsp = {1.0}$thr + {1.0}$pi end reactions begin rate equations v1 = F1*((prot*vm11*(asp*atp - (adp*aspp[t])/keqak))/((atp + (1 + adp/k1adp)*k1atp)*(asp + (k11*(1 + (thr/k1thr)^nak1))/(1 + (thr/(alpha*k1thr))^nak1) + (k11*aspp[t])/k1aspp)) + (prot*vm13*(asp*atp - (adp*aspp[t])/keqak))/((atp + (1 + adp/k13adp)*k13atp)*(1 + (lys/k1lys)^nak3)*(asp + k13*(1 + aspp[t]/k13aspp)))) v2 = (prot*vm2f*(-((nadp*pi*asa[t])/k2eq) + nadph*aspp[t]))/((k2nadph*(1 + nadp/k2nadp) + nadph)*(k2aspp*(1 + pi/k2p)*(1 + asa[t]/k2asa) + aspp[t])) v3 = (prot*(1 + (thr/(alpha3*k3thr))^nhdh1)*vm3f*(nadph*asa[t] - (nadp*hs[t])/k3eq))/((1 + asp/k3asp)*(k3nadph*(1 + nadp/k3nadp) + nadph)*(1 + (thr/k3thr)^nhdh1)*(k3asa + asa[t] + (k3asa*hs[t])/k3hs)) v4 = (atp*prot*vm4f*hs[t])/((1 + lys/k4lys)*(k4hs*(1 + atp/k4iatp)*(1 + thr/k4thr) + hs[t])*(atp + k4atp*(1 + hs[t]/k4ihs))) v5 = (prot*vm5*hsp[t])/(k5hsp + hsp[t]) end rate equations begin parameters F1 = 1.0 alpha = 2.47 alpha3 = 3.93 k11 = 0.97 k13 = 0.323 k13adp = 0.25 k13aspp = 0.017 k13atp = 0.225 k1adp = 0.25 k1aspp = 0.017 k1atp = 0.98 k1lys = 0.391 k1thr = 0.167 k2asa = 0.11 k2aspp = 0.022 k2eq = 56.4150334574039 k2nadp = 0.144 k2nadph = 0.0287 k2p = 10.0 k3asa = 0.245 k3asp = 10.0 k3eq = 3162.27766016838 k3hs = 3.39 k3nadp = 0.067 k3nadph = 0.037 k3thr = 0.094 k4atp = 0.072 k4hs = 0.11 k4iatp = 4.35 k4ihs = 4.7 k4lys = 9.45 k4thr = 1.09 k5hsp = 0.307 keqak = 0.000639 lys = 0.46 nak1 = 4.09 nak3 = 2.78 nhdh1 = 1.41 pH = 7.5 prot = 1.0 vm11 = 0.68987 vm13 = 0.33488 vm2f = 0.920322 vm3f = 3.6707 vm4f = 0.54579 vm5 = 0.2392 adp = 0.17 asp = 1.34 atp = 1.31 nadp = 0.63 nadph = 0.56 pi = 5.0 thr = 3.49 defaultcompartment = 1.0 end parameters begin initial conditions asa[0] = asai aspp[0] = asppi hs[0] = hsi hsp[0] = hspi end initial conditions begin initial values asai = 0.0 asppi = 0.0 hsi = 0.0 hspi = 0.0 end initial values begin assignment rules end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations end species annotations begin units end units