begin name bornheimer1 end name begin reactions reaction0 {1.0}species1 + {1.0}species0 = {1.0}species2 reaction1 {1.0}species1 + {1.0}species3 = {1.0}species5 reaction10 {1.0}species10 = {1.0}species13 + {1.0}species7 reaction11 {1.0}species13 = {1.0}species9 + {1.0}species8 reaction12 {1.0}species2 + {1.0}species3 = {1.0}species11 reaction13 {1.0}species11 = {1.0}species12 + {1.0}species7 reaction14 {1.0}species12 = {1.0}species2 + {1.0}species8 reaction15 {1.0}species9 + {1.0}species0 = {1.0}species14 reaction16 {1.0}species2 + {1.0}species4 = {1.0}species14 reaction17 {1.0}species14 + {1.0}species3 = {1.0}species15 reaction18 {1.0}species11 + {1.0}species4 = {1.0}species15 reaction19 {1.0}species10 + {1.0}species0 = {1.0}species15 reaction2 {1.0}species1 + {1.0}species4 = {1.0}species9 reaction20 {1.0}species15 = {1.0}species16 + {1.0}species7 reaction21 {1.0}species13 + {1.0}species0 = {1.0}species16 reaction22 {1.0}species12 + {1.0}species4 = {1.0}species16 reaction23 {1.0}species16 = {1.0}species14 + {1.0}species8 reaction3 {1.0}species5 = {1.0}species6 + {1.0}species7 reaction4 {1.0}species6 = {1.0}species1 + {1.0}species8 reaction5 {1.0}species9 + {1.0}species3 = {1.0}species10 reaction6 {1.0}species5 + {1.0}species4 = {1.0}species10 reaction7 {1.0}species5 + {1.0}species0 = {1.0}species11 reaction8 {1.0}species6 + {1.0}species0 = {1.0}species12 reaction9 {1.0}species6 + {1.0}species4 = {1.0}species13 end reactions begin rate equations reaction0 = compartment0*(reaction0k1*species0[t]*species1[t] - reaction0k2*species2[t]) reaction1 = compartment0*(reaction1k1*species1[t]*species3[t] - reaction1k2*species5[t]) reaction10 = compartment0*(reaction10k1*species10[t] - reaction10k2*species13[t]*species7[t]) reaction11 = compartment0*(reaction11k1*species13[t] - reaction11k2*species8[t]*species9[t]) reaction12 = compartment0*(-(reaction12k2*species11[t]) + reaction12k1*species2[t]*species3[t]) reaction13 = compartment0*(reaction13k1*species11[t] - reaction13k2*species12[t]*species7[t]) reaction14 = compartment0*(reaction14k1*species12[t] - reaction14k2*species2[t]*species8[t]) reaction15 = compartment0*(-(reaction15k2*species14[t]) + reaction15k1*species0[t]*species9[t]) reaction16 = compartment0*(-(reaction16k2*species14[t]) + reaction16k1*species2[t]*species4[t]) reaction17 = compartment0*(-(reaction17k2*species15[t]) + reaction17k1*species14[t]*species3[t]) reaction18 = compartment0*(-(reaction18k2*species15[t]) + reaction18k1*species11[t]*species4[t]) reaction19 = compartment0*(reaction19k1*species0[t]*species10[t] - reaction19k2*species15[t]) reaction2 = compartment0*(reaction2k1*species1[t]*species4[t] - reaction2k2*species9[t]) reaction20 = compartment0*(reaction20k1*species15[t] - reaction20k2*species16[t]*species7[t]) reaction21 = compartment0*(reaction21k1*species0[t]*species13[t] - reaction21k2*species16[t]) reaction22 = compartment0*(-(reaction22k2*species16[t]) + reaction22k1*species12[t]*species4[t]) reaction23 = compartment0*(reaction23k1*species16[t] - reaction23k2*species14[t]*species8[t]) reaction3 = compartment0*(reaction3k1*species5[t] - reaction3k2*species6[t]*species7[t]) reaction4 = compartment0*(reaction4k1*species6[t] - reaction4k2*species1[t]*species8[t]) reaction5 = compartment0*(-(reaction5k2*species10[t]) + reaction5k1*species3[t]*species9[t]) reaction6 = compartment0*(-(reaction6k2*species10[t]) + reaction6k1*species4[t]*species5[t]) reaction7 = compartment0*(-(reaction7k2*species11[t]) + reaction7k1*species0[t]*species5[t]) reaction8 = compartment0*(-(reaction8k2*species12[t]) + reaction8k1*species0[t]*species6[t]) reaction9 = compartment0*(-(reaction9k2*species13[t]) + reaction9k1*species4[t]*species6[t]) end rate equations begin parameters reaction15k1 = 74300.0 reaction15k2 = 0.00572 reaction16k1 = 22800000.0 reaction16k2 = "5.43e-05" reaction17k1 = 1620000.0 reaction17k2 = 0.00875 reaction18k1 = 6200000.0 reaction18k2 = 0.0433 reaction19k1 = 6300000.0 reaction19k2 = 0.478 reaction20k1 = 25.0 reaction20k2 = 0.00297 reaction21k1 = 13000.0 reaction21k2 = 0.685 reaction22k1 = 49400000.0 reaction22k2 = 0.00421 reaction23k1 = 2.75 reaction23k2 = 2940.0 reaction3k1 = 0.013 reaction3k2 = "9.03e-07" reaction4k1 = 0.0001 reaction4k2 = 62.3 reaction5k1 = 853000.0 reaction5k2 = 0.00468 reaction6k1 = 132000000.0 reaction6k2 = 1.28 reaction7k1 = 386000.0 reaction7k2 = 0.0408 reaction8k1 = 64100.0 reaction8k2 = 0.95 reaction9k1 = 94700000.0 reaction9k2 = 0.00227 reaction10k1 = 0.013 reaction10k2 = "2.22e-09" reaction11k1 = 2.0 reaction11k2 = 1470000.0 reaction12k1 = 44700.0 reaction12k2 = "8.32e-08" reaction13k1 = 25.0 reaction13k2 = 0.244 reaction14k1 = 0.0001 reaction14k2 = 3.83 reaction0k1 = 8780000.0 reaction0k2 = 8.0 reaction1k1 = 529000.0 reaction1k2 = "8.38e-06" reaction2k1 = 636000000.0 reaction2k2 = 0.0179 compartment0 = 1.0 end parameters begin initial conditions species0[0] = species0i species1[0] = species1i species10[0] = species10i species11[0] = species11i species12[0] = species12i species13[0] = species13i species14[0] = species14i species15[0] = species15i species16[0] = species16i species2[0] = species2i species3[0] = species3i species4[0] = species4i species5[0] = species5i species6[0] = species6i species7[0] = species7i species8[0] = species8i species9[0] = species9i end initial conditions begin initial values species0i = 0.0 species1i = 1e-08 species10i = 0.0 species11i = 0.0 species12i = 0.0 species13i = 0.0 species14i = 0.0 species15i = 0.0 species16i = 0.0 species2i = 0.0 species3i = 0.000468 species4i = 1e-06 species5i = 0.0 species6i = 0.0 species7i = 0.0044 species8i = 0.000149 species9i = 0.0 end initial values begin assignment rules parameter1 := 100000000*(0.013*species10[t] + 25*species11[t] + 25*species15[t] + 0.013*species5[t]) parameter0 := 100000000*(species10[t] + species11[t] + species15[t] + species5[t]) end assignment rules begin function definitions end function definitions begin events end events begin process annotations end process annotations begin species annotations species_1 http://identifiers.org/obo.go/GO:0005834 species_3 http://identifiers.org/obo.chebi/CHEBI:15996 species_3 http://identifiers.org/kegg.compound/C00044 species_7 http://identifiers.org/obo.chebi/CHEBI:18367 species_8 http://identifiers.org/obo.chebi/CHEBI:17552 species_8 http://identifiers.org/kegg.compound/C00035 end species annotations begin units end units