Manuscript database

Manuscript first Author Year Journal
A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast. Jörg Schaber 2006 FEBS J.
A novel computational model of the circadian clock in Arabidopsis that incorporates PRR7 and PRR9. Melanie N Zeilinger 2006 Mol. Syst. Biol.
Alternative pathways as mechanism for the negative effects associated with overexpression of superoxide dismutase. Axel Kowald 2006 J. Theor. Biol.
Analysis of a generic model of eukaryotic cell-cycle regulation. Attila Csikász-Nagy 2006 Biophys. J.
Bistable switching and excitable behaviour in the activation of Src at mitosis. Hendrik Fuss 2006 Bioinformatics
Ca2+ -independent phospholipase A2-dependent sustained Rho-kinase activation exhibits all-or-none response. Akio Maeda 2006 Genes Cells
Comparing the regulatory behaviour of two cooperative, reversible enzyme mechanisms. BG Olivier 2006 Syst Biol (Stevenage)
DARPP-32 is a robust integrator of dopamine and glutamate signals. Eric Fernandez 2006 PLoS Comput. Biol.
Diethyl pyrocarbonate, a histidine-modifying agent, directly stimulates activity of ATP-sensitive potassium channels in pituitary GH(3) cells. Sheng-Nan Wu 2006 Biochem. Pharmacol.
Downregulation of PP2A(Cdc55) phosphatase by separase initiates mitotic exit in budding yeast. Ethel Queralt 2006 Cell
Endothelin action on pituitary lactotrophs: one receptor, many GTP-binding proteins. Richard Bertram 2006 Sci. STKE
Mathematical modeling identifies inhibitors of apoptosis as mediators of positive feedback and bistability. Stefan Legewie 2006 PLoS Comput. Biol.
Modelling thrombin generation in human ovarian follicular fluid. Sharene D Bungay 2006 Bull. Math. Biol.
NFAT and NFkappaB activation in T lymphocytes: a model of differential activation of gene expression. Wayne G Fisher 2006 Ann Biomed Eng
Optimal observability of sustained stochastic competitive inhibition oscillations at organellar volumes. Kevin L Davis 2006 FEBS J.
Oscillations and variability in the p53 system. Naama Geva-Zatorsky 2006 Mol. Syst. Biol.
Reduction of a biochemical model with preservation of its basic dynamic properties. Sune Danø 2006 FEBS J.
Signal processing in the TGF-beta superfamily ligand-receptor network. José M G Vilar 2006 PLoS Comput. Biol.
Systems analysis of effector caspase activation and its control by X-linked inhibitor of apoptosis protein. Markus Rehm 2006 EMBO J.
Systems theory of Smad signalling. DC Clarke 2006 IEE Proceedings Systems Biology
Time-dependent hierarchical regulation analysis: deciphering cellular adaptation. Frank J Bruggeman 2006 Syst Biol (Stevenage)
A computational model of mitochondrial deoxynucleotide metabolism and DNA replication. Patrick C Bradshaw 2005 Am. J. Physiol., Cell Physiol.
A minimal generic model of bacteria-induced intracellular Ca2+ oscillations in epithelial cells. Camilla Oxhamre 2005 Biophys. J.
A synthetic gene-metabolic oscillator. Eileen Fung 2005 Nature
A theoretical framework for specificity in cell signaling. Natalia L Komarova 2005 Mol. Syst. Biol.
Analysis of human immunodeficiency virus cytopathicity by using a new method for quantitating viral dynamics in cell culture. Christina Speirs 2005 J. Virol.
Core genetic module: the mixed feedback loop. Paul François 2005 Phys Rev E Stat Nonlin Soft Matter Phys
Experimental and in silico analyses of glycolytic flux control in bloodstream form Trypanosoma brucei. Marie-Astrid Albert 2005 J. Biol. Chem.
Extension of a genetic network model by iterative experimentation and mathematical analysis. James Cw Locke 2005 Mol. Syst. Biol.
HIV dynamics with multiple infections of target cells. Narendra M Dixit 2005 Proc. Natl. Acad. Sci. U.S.A.
Kinetics of intra- and intermolecular zymogen activation with formation of an enzyme-zymogen complex. Matilde Esther Fuentes 2005 FEBS J.
Principles behind the multifarious control of signal transduction. ERK phosphorylation and kinase/phosphatase control. Jorrit J Hornberg 2005 FEBS J.

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