Manuscript database

Manuscript first Author Year Journal
Modeling and estimation of kinetic parameters and replicative fitness of HIV-1 from flow-cytometry-based growth competition experiments. Hongyu Miao 2008 Bull. Math. Biol.
Modeling the segmentation clock as a network of coupled oscillations in the Notch, Wnt and FGF signaling pathways. Albert Goldbeter 2008 J. Theor. Biol.
Modelling and control of HIV dynamics. Alberto Landi 2008 Comput Methods Programs Biomed
Onset dynamics of type A botulinum neurotoxin-induced paralysis. Frank J Lebeda 2008 J Pharmacokinet Pharmacodyn
Qualitative properties and stabilizability of a model for blood thrombin formation S. C. Orfao 2008 J. Math. Anal. Appl.
Selection of in-phase or out-of-phase synchronization in a model based on global coupling of cells undergoing metabolic oscillations. Didier Gonze 2008 Chaos
Simulation of the regulation of EGFR endocytosis and EGFR-ERK signaling by endophilin-mediated RhoA-EGFR crosstalk. Choong Yong Ung 2008 FEBS Lett.
The contribution of the thymus to the recovery of peripheral naive T-cell numbers during antiretroviral treatment for HIV infection. Ruy M Ribeiro 2008 J. Acquir. Immune Defic. Syndr.
Transient heterogeneity in extracellular protease production by Bacillus subtilis. Jan-Willem Veening 2008 Mol. Syst. Biol.
A hidden oncogenic positive feedback loop caused by crosstalk between Wnt and ERK pathways. D Kim 2007 Oncogene
A homeostatic model of IkappaB metabolism to control constitutive NF-kappaB activity. Ellen L O'Dea 2007 Mol. Syst. Biol.
A kinetic core model of the glucose-stimulated insulin secretion network of pancreatic beta cells. Nan Jiang 2007 Mamm. Genome
A quantitative kinetic model for ATP-induced intracellular Ca2+ oscillations. Jinhui Wang 2007 J. Theor. Biol.
A theoretical study on activation of transcription factor modulated by intracellular Ca2+ oscillations. Chun-lian Zhu 2007 Biophys. Chem.
Constraint-based modeling and kinetic analysis of the Smad dependent TGF-beta signaling pathway. Zhike Zi 2007 PLoS ONE
Creatine kinase in energy metabolic signaling in muscle Olav Kongas 2007 Nature Precedings
Data-based mathematical modeling of vectorial transport across double-transfected polarized cells. Kilian Bartholomé 2007 Drug Metab. Dispos.
Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress. Markus Ralser 2007 J. Biol.
Dynamic simulations on the arachidonic acid metabolic network. Kun Yang 2007 PLoS Comput. Biol.
Dynamical modeling of syncytial mitotic cycles in Drosophila embryos. Laurence Calzone 2007 Mol. Syst. Biol.
Emergence of HIV-1 drug resistance during antiretroviral treatment. Libin Rong 2007 Bull. Math. Biol.
Increased glycolytic flux as an outcome of whole-genome duplication in yeast. Gavin C Conant 2007 Mol. Syst. Biol.
Infection dynamics in HIV-specific CD4 T cells: does a CD4 T cell boost benefit the host or the virus? Dominik Wodarz 2007 Math Biosci
Interlinked mutual inhibitory positive feedbacks induce robust cellular memory effects. Tae-Hwan Kim 2007 FEBS Lett.
Kinetic modeling can describe in vivo glycolysis in Entamoeba histolytica. Emma Saavedra 2007 FEBS J.
Meal simulation model of the glucose-insulin system. Chiara Dalla Man 2007 IEEE Trans Biomed Eng
Modeling within-host HIV-1 dynamics and the evolution of drug resistance: trade-offs between viral enzyme function and drug susceptibility. Libin Rong 2007 J. Theor. Biol.
Modelling of circadian rhythms in Drosophila incorporating the interlocked PER/TIM and VRI/PDP1 feedback loops. Z Xie 2007 J. Theor. Biol.
Sharp developmental thresholds defined through bistability by antagonistic gradients of retinoic acid and FGF signaling. Albert Goldbeter 2007 Dev. Dyn.
The impact of the regulatory design on the response of epidermal growth factor receptor-mediated signal transduction towards oncogenic mutations. Jana Wolf 2007 FEBS J.
A kinetic study of a ternary cycle between adenine nucleotides. Edelmira Valero 2006 FEBS J.
A model for the dynamics of human weight cycling. Albert Goldbeter 2006 J. Biosci.

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