| Stochastic and deterministic multiscale models for systems biology: an auxin-transport case study. |
Jamie Twycross |
2010 |
BMC Syst Biol |
| Systems analysis of iron metabolism: the network of iron pools and fluxes. |
Tiago J S Lopes |
2010 |
BMC Syst Biol |
| A sex-role-preference model for HIV transmission among men who have sex with men in China. |
Jie Lou |
2009 |
BMC Public Health |
| Asymmetric division of activated latently infected cells may explain the decay kinetics of the HIV-1 latent reservoir and intermittent viral blips. |
Libin Rong |
2009 |
Math Biosci |
| Control of specific growth rate in Saccharomyces cerevisiae. |
Jacky L Snoep |
2009 |
Microbiology (Reading, Engl.) |
| In silico study of kinetochore control, amplification, and inhibition effects in MCC assembly. |
Bashar Ibrahim |
2009 |
BioSystems |
| Kinetic hybrid models composed of mechanistic and simplified enzymatic rate laws--a promising method for speeding up the kinetic modelling of complex metabolic networks. |
Sascha Bulik |
2009 |
FEBS J. |
| Minimum criteria for DNA damage-induced phase advances in circadian rhythms. |
Christian I Hong |
2009 |
PLoS Comput. Biol. |
| Mitochondrial energetic metabolism: a simplified model of TCA cycle with ATP production. |
Christine Nazaret |
2009 |
J. Theor. Biol. |
| Modelling and simulating interleukin-10 production and regulation by macrophages after stimulation with an immunomodulator of parasitic nematodes. |
Ana Sofia Figueiredo |
2009 |
FEBS J. |
| Monte Carlo analysis of an ODE Model of the Sea Urchin Endomesoderm Network. |
Clemens Kühn |
2009 |
BMC Syst Biol |
| PI3K-dependent cross-talk interactions converge with Ras as quantifiable inputs integrated by Erk. |
Chun-Chao Wang |
2009 |
Mol. Syst. Biol. |
| Synthetic gene networks that count. |
Ari E Friedland |
2009 |
Science |
| Systems biology reveals new strategies for personalizing cancer medicine and confirms the role of PTEN in resistance to trastuzumab. |
Dana Faratian |
2009 |
Cancer Res. |
| Systems-level interactions between insulin-EGF networks amplify mitogenic signaling. |
Nikolay Borisov |
2009 |
Mol. Syst. Biol. |
| The smallest chemical reaction system with bistability. |
Thomas Wilhelm |
2009 |
BMC Syst Biol |
| Theoretical and experimental analysis links isoform-specific ERK signalling to cell fate decisions. |
Marcel Schilling |
2009 |
Mol. Syst. Biol. |
| Understanding the regulation of aspartate metabolism using a model based on measured kinetic parameters. |
Gilles Curien |
2009 |
Mol. Syst. Biol. |
| A bistable Rb-E2F switch underlies the restriction point. |
Guang Yao |
2008 |
Nat. Cell Biol. |
| A mathematical model of glutathione metabolism. |
Michael C Reed |
2008 |
Theor Biol Med Model |
| A mathematical model of spontaneous calcium(II) oscillations in astrocytes. |
Maxim Lavrentovich |
2008 |
J. Theor. Biol. |
| A synthetic Escherichia coli predator-prey ecosystem. |
Frederick K Balagaddé |
2008 |
Mol. Syst. Biol. |
| Cell shape and negative links in regulatory motifs together control spatial information flow in signaling networks. |
Susana R Neves |
2008 |
Cell |
| Computer-aided rational design of the phosphotransferase system for enhanced glucose uptake in Escherichia coli. |
Yousuke Nishio |
2008 |
Mol. Syst. Biol. |
| Control and regulation of gene expression: quantitative analysis of the expression of phosphoglycerate kinase in bloodstream form Trypanosoma brucei. |
Jurgen R Haanstra |
2008 |
J. Biol. Chem. |
| Dynamic simulation of the effect of calcium-release activated calcium channel on cytoplasmic Ca2+ oscillation. |
Xiao-fang Chen |
2008 |
Biophys. Chem. |
| In silico analysis of arginine catabolism as a source of nitric oxide or polyamines in endothelial cells. |
R Montañez |
2008 |
Amino Acids |
| In-silico modeling of the mitotic spindle assembly checkpoint. |
Bashar Ibrahim |
2008 |
PLoS ONE |
| Isoform switching facilitates period control in the Neurospora crassa circadian clock. |
Ozgur E Akman |
2008 |
Mol. Syst. Biol. |
| Low-level HIV-1 replication and the dynamics of the resting CD4+ T cell reservoir for HIV-1 in the setting of HAART. |
Ahmad R Sedaghat |
2008 |
BMC Infect. Dis. |
| Mad2 binding is not sufficient for complete Cdc20 sequestering in mitotic transition control (an in silico study). |
Bashar Ibrahim |
2008 |
Biophys. Chem. |
| Membrane identity and GTPase cascades regulated by toggle and cut-out switches. |
Perla Del Conte-Zerial |
2008 |
Mol. Syst. Biol. |