Manuscript database

Manuscript first Author Year Journal
Explaining the enigmatic K(M) for oxygen in cytochrome c oxidase: a kinetic model. K Krab 2011 Biochim. Biophys. Acta
Glutamine and α-ketoglutarate as glutamate sources for glutathione synthesis in human erythrocytes. Stephney Whillier 2011 FEBS J.
Heterogeneity reduces sensitivity of cell death for TNF-stimuli. Monica Schliemann 2011 BMC Syst Biol
Mathematical modelling of the sporulation-initiation network in Bacillus subtilis revealing the dual role of the putative quorum-sensing signal molecule PhrA. Sara Jabbari 2011 Bull. Math. Biol.
Modelling HIV/AIDS in the presence of an HIV testing and screening campaign. F Nyabadza 2011 J. Theor. Biol.
Overexpression limits of fission yeast cell-cycle regulators in vivo and in silico. Hisao Moriya 2011 Mol. Syst. Biol.
Programming an in vitro DNA oscillator using a molecular networking strategy. Kevin Montagne 2011 Mol. Syst. Biol.
Progressive methylation of ageing histones by Dot1 functions as a timer. Dirk De Vos 2011 EMBO Rep.
Self-tolerance and autoimmunity in a regulatory T cell model. HK Alexander 2011 Bull. Math. Biol.
Synthetic conversion of a graded receptor signal into a tunable, reversible switch. Santhosh Palani 2011 Mol. Syst. Biol.
Synthetic in vitro transcriptional oscillators. Jongmin Kim 2011 Mol. Syst. Biol.
The auxin signalling network translates dynamic input into robust patterning at the shoot apex. Teva Vernoux 2011 Mol. Syst. Biol.
The influence of cytokinin-auxin cross-regulation on cell-fate determination in Arabidopsis thaliana root development. Daniele Muraro 2011 J. Theor. Biol.
The within-host dynamics of malaria infection with immune response. Yilong Li 2011 Math Biosci Eng
The within-host dynamics of malaria infection with immune response. 2011 Math Biosci Eng
Thermodynamically consistent model calibration in chemical kinetics. Garrett Jenkinson 2011 BMC Syst Biol
A revisit to the one form kinetic model of prothrombinase. Chang Jun Lee 2010 Biophys. Chem.
A simple self-maintaining metabolic system: robustness, autocatalysis, bistability. Gabriel Piedrafita 2010 PLoS Comput. Biol.
Combining theoretical analysis and experimental data generation reveals IRF9 as a crucial factor for accelerating interferon α-induced early antiviral signalling. Tim Maiwald 2010 FEBS J.
Covering a broad dynamic range: information processing at the erythropoietin receptor. Verena Becker 2010 Science
Decoupling of receptor and downstream signals in the Akt pathway by its low-pass filter characteristics. Kazuhiro A Fujita 2010 Sci Signal
Design principles of nuclear receptor signaling: how complex networking improves signal transduction. Alexey N Kolodkin 2010 Mol. Syst. Biol.
Dynamics within the CD95 death-inducing signaling complex decide life and death of cells. Leo Neumann 2010 Mol. Syst. Biol.
Experimental and computational analysis of polyglutamine-mediated cytotoxicity. Matthew Y Tang 2010 PLoS Comput. Biol.
Feedback between p21 and reactive oxygen production is necessary for cell senescence. João F Passos 2010 Mol. Syst. Biol.
Ligand-specific c-Fos expression emerges from the spatiotemporal control of ErbB network dynamics. Takashi Nakakuki 2010 Cell
Mathematical modelling of the agr operon in Staphylococcus aureus. Sara Jabbari 2010 J Math Biol
Modelling and experimental analysis of hormonal crosstalk in Arabidopsis. Junli Liu 2010 Mol. Syst. Biol.
Quantifying the early immune response and adaptive immune response kinetics in mice infected with influenza A virus. Hongyu Miao 2010 J. Virol.
Reconstruction and Use of Microbial Metabolic Networks: the Core Escherichia coli Metabolic Model as an Educational Guide. R M T Fleming 2010 EcoSal Plus
Reduction of off-flavor generation in soybean homogenates: a mathematical model. Nathan Mellor 2010 J. Food Sci.
Restriction point control of the mammalian cell cycle via the cyclin E/Cdk2:p27 complex. Riaan Conradie 2010 FEBS J.

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