Latest News for JWS Online

SysMO evaluation meeting (26-27 May 2011, Oxford, UK)

The whole SysMO-DB team was present at the evaluation meeting, where Carole presented the group's work.

Data and modeling workshop (5-6 May 2011, Heidelberg, Germany)

Jacky and Wolfgang Mueller presented at the data and modeling workshop.

ENFIN Enabling Systems Biology (12-14 April 2011, London, UK)

Katy, Stuart and Jacky presented at the enabling Systems Biology and Bioinformatics workshop.

UNICELLSYS meeting (3 April - 7 April 2011, Palma de Mallorca, Spain)

Jacky presented the JWS Online site for the UNICELLSYS consortium. All models constructed in the consortium are available to the members via secure pages in JWS Online.

Modeling workshop for SysMO PALS (7 Mar - 9 Mar 2011, Heidelberg , Germany)

The SysMO DB team presented a modeling workshop for the model PALS of the SysMO projects.

FEBS Systems Biology course (27 Feb - 3 Mar 2011, Innsbruck, Austria)

Jacky presented a tutorial on SBML, SBGN and MIRIAM modeling standards during the FEBS Systems Biology course.

Model constructor

Try the new JWS Online model constructor. With this tool you can build a model from scratch using a simple text based format, or upload an existing model (SBML or JWS Online format) and adapt it to your liking. The constructor has an automated schema generator and good error catching facilities. Models can be saved in SBML files or JWS formats and directly simulated in the JWS Online simulator. The constructor, which is still in development, will be a simple one stop for model construction and saving in SBML format, with SBGN and MIRIAM standards for representation and annotation. URL for the constructor: (~/webMathematica/Examples/JWSconstructor_panels/DatFileReader.jsp), with ~ (http://jjj.biochemistry.sun.ac.za; http://jjj.bio.vu.nl; http://jjj.mib.ac.uk).

Advanced modeling workshop at ICSB (15 Oct 2010, Edinburgh, UK)

Jacky was invited to the advanced modeling workshop organized by Ion Moraru and Michael Blinov, connected to the ICSB meeting. Jacky presented JWS Online and some new modeling tools and algorithms developed in our group.

ISGSB (6-9 Sep 2010, Vladimir, Russia)

At the bi-annual meeting of the International Study Group for Systems Biology (formerly known as BTK), Jacky presented work on the experimental application of ecological control analysis, work by Christie Malherbe a PhD student in his group.